BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033E07SP1|AL429756
(855 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1325 408 e-114
3x_Contig1170 406 e-113
>3x_Contig1325
Length = 7053
Score = 408 bits (206), Expect = e-114
Identities = 206/206 (100%)
Strand = Plus / Plus
Query: 1 aattcactagcaggaatcagatctggtgaaggtgcatctgccacgaatttgaacttgttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6845 aattcactagcaggaatcagatctggtgaaggtgcatctgccacgaatttgaacttgttg 6904
Query: 61 ataccaacgggtataggacccaccaggatagaatccaattcttgatcatggtcaagtgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6905 ataccaacgggtataggacccaccaggatagaatccaattcttgatcatggtcaagtgat 6964
Query: 121 ctagaagaaccaacatacgtcaatttccattccaaatcgtgttttaatggctcaagacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6965 ctagaagaaccaacatacgtcaatttccattccaaatcgtgttttaatggctcaagacat 7024
Query: 181 tcaaaagtgatttcaaattcataagg 206
||||||||||||||||||||||||||
Sbjct: 7025 tcaaaagtgatttcaaattcataagg 7050
>3x_Contig1170
Length = 4668
Score = 406 bits (205), Expect = e-113
Identities = 205/205 (100%)
Strand = Plus / Plus
Query: 651 ggtgaaggaagatgcaatgtagaggggaagccgcagcacggccatttccccttctttttt 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtgaaggaagatgcaatgtagaggggaagccgcagcacggccatttccccttctttttt 60
Query: 711 ttttgttacaccgtcaacgatgtataagtattagattcttgtacgaattcttgcgacaaa 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttttgttacaccgtcaacgatgtataagtattagattcttgtacgaattcttgcgacaaa 120
Query: 771 ggtcttccattattgagcgagccatacgatagcacggccgcagaggaagtagacgatgat 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggtcttccattattgagcgagccatacgatagcacggccgcagaggaagtagacgatgat 180
Query: 831 ggtgaatgagagccatccaattcag 855
|||||||||||||||||||||||||
Sbjct: 181 ggtgaatgagagccatccaattcag 205
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,127
Number of Sequences: 1807
Number of extensions: 16127
Number of successful extensions: 307
Number of sequences better than 1.0e-20: 2
length of query: 855
length of database: 10,358,551
effective HSP length: 16
effective length of query: 839
effective length of database: 10,329,639
effective search space: 8666567121
effective search space used: 8666567121
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)